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Topic: Geometry optimization of hydronium & water system  (Read 2069 times)

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Offline anastasiya119

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Geometry optimization of hydronium & water system
« on: October 28, 2016, 05:03:08 AM »
Hello! Could anybody give me any instructions about optimization of H3O & H2O system in Gaussian? I`m not a chemist, that`s why I need your help.

I need to obtain energy of activation for proton transfer from hydronium to water molecule, so, I suppose coordinates of two oxygens to be frozen, because then this algorithm of calculation will be used for the structures, which coordinates should be taken from PDB files.

As I see, firstly I should do geometry optimization for reactants and products before PES and searching a transition state. While I try to optimize reactants, I start from this:



I use B3LYP/6-31g(d), and the input code is:

# B3LYP/6-31g(d) Opt

Optimization of H3O H2O

1 1
O -1 0.0000000 0.0000000 0.0000000
H 0 0.9700000 0.0000000 0.0000000
H 0 -0.3921668 -0.8871895 0.0000000
H 0 -0.3954392 0.6020616 0.6496535
O -1 2.5440439 0.0000000 0.0000000
H 0 3.5040439 0.0000000 0.0000000
H 0 2.2971964 0.9277210 0.0000000

After optimization I get "Error termination request processed by link 9999" in the end of the output file, and picture is:



Does anybody know how to put it right and how should I optimize such system?

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