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Chemistry Forums for Students => Organic Chemistry Forum => Topic started by: Mr.rose on March 26, 2010, 06:05:35 AM

Title: Help With Visualisation of TLC and other things.
Post by: Mr.rose on March 26, 2010, 06:05:35 AM
Hey guys,

I have a solution of the following two chemicals:

-Testosterone propionate (4-Androsten-17ß-ol-3-one Propionate)
-Estradiol Benzoate (17β-Estradiol 3-benzoate)

I'm Going to Run a Gravity Column chromatography with silica gel as my stationary phase to separate the two chemicals from one solution. Firstly I'm having trouble with picking an eluent. I don't know how i can obtain my Rf value when i already have my two components in solution. Do i just run a sample of it on a TLC plate and see how far the compounds separate? I'm not sure how easy this is going to be since both molecules are pretty similar, I mean Testosterone Proprionate is C22H32O3 with a MM of 362.5 and Estrodiol Benzoate is C25H28O3 with a MM of 376.5.

Secondly, these compounds are colorless in solution, which in this case they are both dissolved in Methanol (could i use this an an eluent since they are already dissolved in it?). My understanding is that they will not visualize under UV light because they need to have a florescent added? Since my TLC plates are homemade with silica gel and plaster of paris as a binder, i don't know how accurate everything will be. All i want is to be able to tell my fractions apart at the end of the column chromo experiment. But with these molecules so similar, I don't know how i can tackle this.

Any help will be kindly appreciated.

Title: Re: Help With Visualisation of TLC and other things.
Post by: Mr.rose on March 28, 2010, 10:26:44 AM
Any one?
Title: Re: Help With Visualisation of TLC and other things.
Post by: sjb on March 28, 2010, 10:39:56 AM
Typically, yes you'd run a TLC or two to try and see where the two compounds elute, and then collect many fractions in small vials to try and get separation

It's possible that the oestradiol will fluoresce by itself, but you may need to stain your plates to see where the testosterone is - perhaps something like permanaganate or similar?
Title: Re: Help With Visualisation of TLC and other things.
Post by: bolo on March 28, 2010, 03:54:15 PM
Or you can use a 10% solution of H2SO4 and carbonization on a heater. It is typical procedure to visualisate steroids.
Title: Re: Help With Visualisation of TLC and other things.
Post by: Mr.rose on May 03, 2010, 04:49:24 AM
Hey guys, thanks for your replies.

I cannot figure out a good eluent, would Methanol (99%) work as a good eluent? What are some common eluents that work well with many chemicals?

I can stain the sample with potassium permanaganate, would this be a good option if it does not originally show up under the black light?

What type of procedure are we looking at for the carbonization with H2SO4?
Title: Re: Help With Visualisation of TLC and other things.
Post by: sjb on May 03, 2010, 05:14:28 AM
Methanol might be quite a bit too polar, ideally you'd be looking at Rfs of ~ 0.3 - 0.7 to make sensible suggestions from TLC. Perhaps something like ether, or DCM; though it is a bit empirical.
Title: Re: Help With Visualisation of TLC and other things.
Post by: Mr.rose on May 03, 2010, 05:33:42 AM
The chemicals are already dissolved in Methanol, that is why i am asking. I would have to form a re-crystallization method to remove them from solution, or would i be able to evaporate on a hot plate?

Hmm, either and DCM are both extremely pricey in my part of the world, are there any other common eluents that may work? Do you have a link to a site which contains them, then i can experiment?

Also I'm having trouble finding a suitable silica gel, which one of these would work?

1. http://www.shopdynamicadsorbents.com/index.php?main_page=product_info&cPath=88_98&products_id=1096
2. http://www.shopdynamicadsorbents.com/index.php?main_page=product_info&cPath=88_96&products_id=1073
3. http://www.shopdynamicadsorbents.com/index.php?main_page=product_info&cPath=88_89&products_id=1006

Thankyou.
Title: Re: Help With Visualisation of TLC and other things.
Post by: sjb on May 03, 2010, 05:41:49 AM
The silica itself should be OK, I think (have not made my own plates). Once you have the plates, you should be able to spot them, then perhaps heat before eluting to ensure a dry spot to drive off the methanol.
Title: Re: Help With Visualisation of TLC and other things.
Post by: Mr.rose on May 03, 2010, 09:27:45 AM
With a bit of reading, i came across that methanol and CH2CL2 don't have that much of a difference in polarity.

Predicted dipole moment of methanol
1.882 Debye

Predicted dipole moment of CH2Cl2
1.807 Debye

So im assuming that use of either as an eluent could be considered?

Any very commonly available chemicals that can be used as an eluent, Im looking for a selection so i can calculate a good Rf.
Title: Re: Help With Visualisation of TLC and other things.
Post by: Doc Oc on May 03, 2010, 10:18:49 AM
Just looking at those two structures I think you might be able to separate them with a combination of hexane and ethyl acetate.  The free hydroxyl of the estradiol should make it move much more slowly than the testosterone.  I agree that the estradiol should show up under UV, and it's possible the testosterone will as well due to the a,b-unsaturated ketone.  If not, KMnO4 (permanganate) should certainly get them both to show up on a silica plate.

I only use DCM/MeOH combinations when I'm trying to separate things like peptides that have very sticky hydrogen bonding components that make them slow-moving in silica.  I wouldn't recommend this as a go-to solvent combination.
Title: Re: Help With Visualisation of TLC and other things.
Post by: OC pro on May 03, 2010, 11:46:10 AM
I (as a steroid chemist) strongly recommend hexane / ethyl acetate as eluent. Try a mixture consisting of 90%hexane, 10% ethyl acetate. Instead of hexane one normally uses now petroleum ether since hexane is highly neurotoxic.
Staining solutions: anisaldehyde solution (especially for steroids) or Ce(SO4)2/phosphomolybdate.
The androstenone will also be UV-active since it contains an enone structure. These steroids are normally UV-active. Therefore, staining solution is not really necessary.

Title: Re: Help With Visualisation of TLC and other things.
Post by: Mr.rose on May 03, 2010, 12:14:55 PM
Thankyou for your help,

One problem is that i do not have enough hexane to preform a proper procedure, I have 100mL and just checked with my supplier, and i won't be able to receive any until the 6th of next month. I have an abundance of ethyl acetate (well 500mL or so) and an abundance of methanol. I was thinking a running the methanol first, then running the ethyl acetate afterward, hopefully obtaining a good separation.

Thank you for the staining solutions, i have seen those on my suppliers list, i will give them a go.

After a bit of consideration, i was thinking, i could create a very alkaline solution using a supersaturated solution of NaOH with at a 10:1 molar ratio to the quantity of estrodiol benzonoate, which should turn the estrodiol into a salt and leave the androstenone untouched for a period of time. Then the androstenone can be recrystallized out, and i can obtain proper values for these compounds individually, as on a TLC plate i will not be able to tell them apart.
Title: Re: Help With Visualisation of TLC and other things.
Post by: Doc Oc on May 03, 2010, 12:43:29 PM
If you have pentane or heptane, those are perfectly good substitutes for hexane (the petroleum ether is a mixture of several hydrocarbons and it's cheap so that works well).

DO NOT use the NaOH solution on the estradiol, it will hydrolyze the benzyl ester that is protecting the alcohol as well as the propionate of the testosterone.  This will not improve separation and you will ruin your products.

Also, don't do MeOH then EtOAc, you're running the column backwards (ie; most polar solvent first, then less polar).  Even in pure ethyl acetate the two compounds will likely run together.
Title: Re: Help With Visualisation of TLC and other things.
Post by: Mr.rose on May 03, 2010, 01:23:08 PM
Yes sorry you are right, i meant, run EtOAc before MeOH.

Ok I will run hexane and ethyl Acetate. So i get a picture of how much i would need, now many mL of eluent will it take before you estimate that both molecules will completely separate. There is 20,000mg of androstenone and 2,000mg of estrodial benzonoate in solution.

I will run the ethyl Acetate first then the hexane. But i do not know how long to run each for?

Yeh i realized that it would hydrolyze the proprionate ester as well, but was thinking that it would take at least 15-30min before that started, whilst a majority, if not all of the estrodial ester. I'll stick with the chromatography.

So how can i calculate separation time, as my biggest fear is that i wont be able to tell them apart because they are so similar.
Title: Re: Help With Visualisation of TLC and other things.
Post by: OC pro on May 03, 2010, 01:30:18 PM
They can be easily separated...trust me.
Some advices: never use pure methanol in combination with silica gel TLC plates. It will simply dissolve the silica gel. Maxium is ~10% methanol. More doesn´t make sense.
Back to your problem: have you run a proper TLC with the androstenone/estradiol solution yet? This is a must before you run the column.
Title: Re: Help With Visualisation of TLC and other things.
Post by: Doc Oc on May 03, 2010, 05:02:11 PM
Hold on, did I read that correctly?  You're trying to separate 20 g of  androstene and 2 g of estradiol?  If that is the case I don't think you have enough solvent the separate the compounds, 100 mL of hexane certainly isn't enough.  This would also require quite a large glass column and a large amount of silica.  All are things that complicate the separation by column chromatography (not to mention that if you're doing gravity drip rather than flash chromatography you could very well be running this column for days, and that's not an exaggeration).
Title: Re: Help With Visualisation of TLC and other things.
Post by: littlebug on May 03, 2010, 10:05:31 PM
There is 20,000mg of androstenone and 2,000mg of estrodial benzonoate in solution.

Hold on, did I read that correctly?  You're trying to separate 20 g of  androstene and 2 g of estradiol?

My best guess is that he's using a comma instead of the decimal, as is done in some European countries.  :)
Title: Re: Help With Visualisation of TLC and other things.
Post by: Mr.rose on May 04, 2010, 01:46:51 AM
Yes you did read that correctly.

That is all the hexane i have on me at the moment, i will be ordering more. How many L or hexane and Ethyl Acetate will it take?

My setup involves a 100mL column, with a length of 1m , so it is a small column. I have ordered some Alumina as i think it would be a better and more 'stable' choice over silica gel. I just don't know which type of Alumina is best, so i ordered a few activation levels.

My TLC plate are in route to me, I am just waiting for them to arrive. I have ordered silica gel backed plates, would this be a problem since i am switching to Alumina, I am assuming the Rf will change?

Days, hmm, that is quite a bit of collection.
Title: Re: Help With Visualisation of TLC and other things.
Post by: OC pro on May 04, 2010, 06:29:19 AM
Alumina is quite different to silica gel. You can not combine silica gel TLC plates with an alumina column. Rf values can differ dramatically.
Gravity column is not by far the best but it will not take days. This is nonsense. But at least 2 to 4 hours you can expect. Fractions should be around 500 ml.
I assume ca. 5 to 10 l of hexane. 1l of ethyl acetate should be enough.
Title: Re: Help With Visualisation of TLC and other things.
Post by: Mr.rose on May 05, 2010, 04:36:03 AM
Ok, 100mL column, silica gel 60-200mesh 60A, 4L Hexane and 1L Ethyl Acetate. I think i am all set.

Hopefully i have enough solvent. Am i suppose to run the Ethyl acetate first as it is more polar, then after i use a liter, i run the hexane until i run out.

So that will be 10 fractions, at 500mL fractions. Is that good? or should i do 250mL fractions. I would hate to get one fraction with both compounds in it.

What should the flow rate be? 2-3 drops per second?

Thankyou again for all your help guys.
Title: Re: Help With Visualisation of TLC and other things.
Post by: helenn on May 05, 2010, 04:46:02 AM
You need to run the least polar hexane first, and I would run a gradient increasing the amount of ethyl acetate. But you should find the best ratio of sovents to give the best separation by running the TLCs first.
Title: Re: Help With Visualisation of TLC and other things.
Post by: democanarchis on May 05, 2010, 09:02:23 AM
There are a lot of problems here. You say that your materials to be separated are dissolved in MeOH. How do you plan to load them onto the column? It doesn't sound like you have a lot of equipment, which would make it difficult to dry load it (need rotary evaporator, silica, silica trap), and they probably aren't soluble enough in the mobile phase to use that.

Do i read you correctly in that you have a 100mL column? IE the total internal volume is 100mL? I'm sorry, but thats completely ridiculous. I think silica gel is something like 0.7g/cm3 wet. That means even without allowing for headspace for solvent or sample, you're talking about 70g of silica. To separate 22g of material. Usually if you have good separation (>0.2 rf), you want something like 25g silica/g material to be separated. Thats about 550g, or nearly 8x the capacity of your column.

I really really disadvise this. If you go ahead with the column, run a small column with like 0.5g of material and verify that you get separation with your mobile phase. Have you tried recrystallising a small portion of your material? With a 10:1 ratio I would be very surprised if you could not find a suitable recrystallisation technique.
Title: Re: Help With Visualisation of TLC and other things.
Post by: Doc Oc on May 05, 2010, 09:03:39 AM
Helenn is absolutely right, if you don't run TLC's first you're doing this purification blindly.

1) To clarify my earlier question, do you have 20 g of the testosterone or 20 mg?  That's a HUGE difference that will considerably change the way you need to purify the compounds (you won't be able to purify 20 g on the 100 mL column you are using, you will need a MUCH larger column).

2) You are thinking of running the solvents backwards again, it should always be least polar to more polar.  However, you don't run the solvents one after the other, you mix them.  So that's why you need to do TLC, to find out which combination works best.  It may be 9:1 hexane/EtOAc or it could be as high as 1:1 (although this is probably too polar for your compounds).  What you're looking for is the solvent combination that gives the best separation between your compounds.

3) Fraction size will depend on how well your compounds separate on the TLC.  If the two spots are far apart you can collect larger fractions.  But if they're close (which I'm guessing they will be) then you'll want to make smaller fraction collections to minimize the mixed fractions.
Title: Re: Help With Visualisation of TLC and other things.
Post by: Mr.rose on May 06, 2010, 04:55:45 AM
Thanks for the criticism, that is why I am here :).

Ok new equipment. 600mm column with a 1L reservoir, 4L of n-hexane, 1L of Ethyl Acetate, Silica TLC plates are on there way, then i will start with a 9:1 mix of hex and ethy, and then 8:2, 7:3, etc etc until i find the best separation.

Yes its 20g of testosterone acetate and 2g of estrodial benzonoate.

I can easily recrystallize the testosterone and estrodial by dripping some de-ionised water into the container. But i may have to do this several times, and i double i will get 100% yield from this method. What would be the best method for recrystallization?
Title: Re: Help With Visualisation of TLC and other things.
Post by: democanarchis on May 06, 2010, 08:10:48 AM
I'd try a fractional recrystallisation - Recrystallise, separate crystals and mother liquor, evap mother liquor to dryness, recrystallise etc. I wouldn't use deionised water, you ideally want an organic solvent that is reasonably volatile, you'll need to try a few small recrystallisations, ethanol and cyclohexane are the two solvents I go to first.
Title: Re: Help With Visualisation of TLC and other things.
Post by: Mr.rose on May 06, 2010, 08:32:34 AM
Sorry I'm not to familiar with many chemistry methods, I am an engineer, my specialty is with machines not with chemistry.

So what your saying is that with my solution of 10:1 test/estro dissolved in methanol, I have to add either ethanol or cyclohexane which will recrystallize my products? I though that test and estro are both soluble in alcohols?

Will this recrystallize both the test and the estro?

Out of curiosity, to save a bit of money, can a column be made from clear PVC pipe?
Title: Re: Help With Visualisation of TLC and other things.
Post by: democanarchis on May 06, 2010, 12:02:42 PM
You'll need to evaporate the methanol, you can generally only recrystallise a solid. Basically you are looking for a solvent that the compound isn't soluble in/is sparingly soluble in at room temperature, that when heated fully dissolves the compound. If your compounds are soluble in ethanol at room temperature then that isn't a good choice. I would try the hexane.

Basically what you do: Take a small sample of the methanol solution and evaporate it. Take a small amount of that solid in a test tube. Add a few drops of hexane and see if it dissolves. If not, then take a separate testtube and place the remaining solid in it. Heat a small amount of hexane to below boiling point. Add it dropwise to dissolve the solid in a minimum amount. Allow it cool to room temperature on its own then place in an ice bath. The major constituent of the solution should crystallise leaving the minor compound in solution.
Title: Re: Help With Visualisation of TLC and other things.
Post by: Mr.rose on May 06, 2010, 12:13:26 PM
I see how that works. So what would the yield be of the major constituent? Would greater than 90% crystallize. I'm sure a small amount of estrodial will crystallize as well, correct? So if i run a TLC on it, wouldn't it be like running a TLC on the original product?
Title: Re: Help With Visualisation of TLC and other things.
Post by: Mr.rose on May 06, 2010, 12:32:19 PM
I dug up a bit of information

In the hexane, the ratio of solubility of TP to EB was about 100 to 1.

Estrogen has a solubility of 2.5mg/L in ethanol and 20mg/ML in DMSO

Testosterone proprionate is practically insoluble in water; freely soluble in ethanol (~750 g/l) TS and ether R; soluble in vegetable oils.

and also from another source, TP in ethanol: soluble10 mg/mL, 45% (w/v) aq 2-hydroxypropyl-β-cyclodextrin: soluble4.4 mg/mL, H2O: insoluble

Maybe we can use ethanol instead of hexane. With only 2.5mg/L solubility of EB in ethanol, and virtually 100% solubility of TP.

Also with the mobile phase, after a bit of reading these two seem to be popualr choices for these chemicals.

1) 1:1:2 ethyl acetate to tetrahydrofuran to hexane
2) 92 volumes of dichloroethane R, 8 volumes of methanol R, and 0.5 volumes of water
3)9 volumes of chloroform R and 1 volume of methanol R
Title: Re: Help With Visualisation of TLC and other things.
Post by: democanarchis on May 07, 2010, 08:39:22 AM
I didn't realise the two products had such drastically different solubilities. In this case, the answer is easy:

20g of testosterone and 2g estrogen. If as you say testosterone has a solubility of 750g/L in EtOH, 20g should dissolve in 20(g)/750(g/L)= 0.02666L or 26.66mL EtOH. If estrogen only has a solubility of 2.5mg/L, only 0.0665mg will dissolve which is negligible.

[EDIT] Just read your other source gives a solubility of 10mg/mL for testosterone. In that case, you'd need 2L of EtOH, but that would still only dissolve 5mg of estrogen which is still going to give you 99.975% pure. What you could do is add 100mL, filter and weigh the solid. If its greater than 2g, put it back in solution and add more EtOH accordingly until you only have 2g of solid filtered material.

So: evaporate your MeOH soln to dryness. Add the solid to a flask with say 100mL EtOH and and add a magnetic stirrer. Put on a hotplate and stir at RT. Filter the solution and weigh the solid. If >2g return to solution and add more EtOH, if not then filter the solution and remove the EtOH from the filtrate in vacuo. Your filtered material is pure estrogen, your dried filtrate is pure testosterone.
Title: Re: Help With Visualisation of TLC and other things.
Post by: Mr.rose on May 07, 2010, 09:21:25 AM
Thankyou for your information, but I have one problem, when i puleld that info, it said the solubility of estrodial is 2.5mg/L in ethanol, it never mentioned estrodial benzoate, which is why i believe the solubility will much different. And for the life of me i cannot find its solubility in actual units.

One abstract i found for Testosterone propionate is:

This product is soluble in chloroform (50 mg/ml). It is
also soluble in a number of oils, including ethyl oleate.7
The oil solutions can be sterilized by maintaining at
150 °C for 1 hour. It is practically insoluble in water,
soluble 1 in 6 of ethanol, 1 in 4 of acetone, 1 in 20 of
ethyl oleate, and 1 in 30 of propylene glycol.

But i do not know what units they are referring to when they say "1 in 6" etc.
Title: Re: Help With Visualisation of TLC and other things.
Post by: democanarchis on May 07, 2010, 10:45:02 AM
1 in 6 I would take to mean 1mg/6mL. In that case, and given all the confilicting solubility data i'd pick the recrystallisation method. You won't get greater than 90% yield but it should be completely pure - you will only get one product crystallising. When you dry it then recrystallise again, verify which chemical the filtered solid is, as the minor product may crystallise given the change in product ratio, but again, it should be pure. 2 crystallisations should give you >95% yield pure.

You mentioned ethanol as a solvent for recrystallisation - as one of your materials is nearly freely soluble in it, its a bad choice. I'd try the hexane first, then maybe something a bit more polar like toluene if that doesnt work