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Topic: Complexation simulation  (Read 1796 times)

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Offline joe900

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Complexation simulation
« on: February 05, 2015, 10:34:19 AM »
So i have a host-guest complex, my starting structure for calculations was like the guest molecule was already placed within the cavity.
i have heard that another way is to define some distance values between the host and guest, change the distance value and choose the structure with the lowest energy and then optimize the choosen structure with molecular dynamics... there is something like "ABF"?

i need to know about advantages and disadvantages of both of this methods...

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