A couple of questions for you:
Where did you find this procure? Why are you following it diligently, to start with, and then want to change it later?
You have two liquids, one floating on another, why do you want to use filter paper to separate them? Can you think of better laboratory equipment to use? Do you really think filter paper will work?
Why are you executing this procedure? You seem to have very specific procedures, then you suddenly seem to not understand the basics. Are you expecting to use this isolated product as a medicine or food? Because we're not allowed to help, in that case. If this is a gee-wiz lookit whaticando sort of question, we're still glad to help, but you may have to put up with us actually trying to teach you something about chemistry as we go along.