i have not came across such an observation. anyway, one possible answer could be as follows.
both ketone as well as your ester contains alpha hydrogen (i suppose). which means both can undergo claisen condensation in presence of a base. so if you added base to ketone first, obviously, self condensation of ketone will start, decreasing the yield of your expected product.
on the otherhand, if you mix the ketone and ester first and then the base, chance for cross condensation increases. you should remember that even in this case, self condensation of ketone and ester cannot be avoided.
hope this reply will help you.