The 1H shifts for the pyridine and toluene methyls are close enough as to make no difference (you can look them up on SDBS). However, just because electrons can't be moved around by resonance, they can still move through the sigma framework. What phenomenon causes unequal distribution of electrons within bonds?
Modification: "does that mean they both have the same degree of delocalisation", they do not have the same degree of delocalization. The delocalization energy of pyridine is 117 kJ·mol−1 vs. 150 kJ·mol−1 in benzene (via Wikipedia, because I'm feeling kind of lazy). However, since you established that electron density is not being moved to or from the methyl via resonance, this shouldn't make a huge difference. Speculation: it may explain the NMR results if pyridine has a weaker ring current.